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1、Yeast Gene Regulation Prediction Dataset(酵母基因規(guī)則回歸預(yù)測數(shù)據(jù)集)數(shù)據(jù)摘要:This dataset was used in the 2002 kdd cup data mining competition. The data describes the activity of some (hidden) biological system in yeast cells. Particularly, a set of yeast strains have been generated where each of them is characteriz
2、ed by a single gene being knocked out (i.e. disabled). Thus each example in the data set is related to a single knocked-out gene which is labeled with a discrete measurement of how active the hidden system in the cell is when this gene is knocked out.中文關(guān)鍵詞:數(shù)據(jù)挖掘,生物學(xué),酵母基因,KDD Cup 1998,英文關(guān)鍵詞:Data minin
3、g,Biology,Yeast Gene,KDD Cup 1998,數(shù)據(jù)格式:TEXT數(shù)據(jù)用途:The data can be used for regulation prediction.數(shù)據(jù)詳細(xì)介紹:Yeast Gene Regulation Prediction dataset · Description:This dataset was used in the 2002 kdd cup data mining competition. The data describes the activity of some (hidden) biological system in y
4、east cells. Particularly, a set of yeast strains have been generated where each of them is characterized by a single gene being knocked out (i.e. disabled). Thus each example in the data set is related to a single knocked-out gene which is labeled with a discrete measurement of how active the hidden
5、 system in the cell is when this gene is knocked out. There are three labels: o "nc": This label indicates that the activity of the hidden system (i.e. yeast strain) was not significantly different than the baseline. o "control": Indicates that the activity of the hidden system w
6、as significantly different than the baseline for the given instance, but that the activity of another hidden system (the control) was also significantly changed versus its baseline. o "change": Describes examples which the activity of the hidden system was significantly changed, but the ac
7、tivity of the control system was not significantly changed. A variety of other information accompanies the above data. These data sources include categorical features describing gene localization and function, abstracts from the scientific literature(MEDLINE), and a table of protein-protein interact
8、ions that relate the products of pairs of genes. A local copy of file describing the whole database is available here. · Objections: Too complex/challenging for a DME mini-project. There are three sources of data to take into account (including carrying out information extraction from the scientific abstracts). One of these sources is information on protein-protein interactions, which will have
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